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4MEH

In vitro evolved glmS ribozyme triple mutant, calcium ion complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)1.0000
Spacegroup nameP 21 21 2
Unit cell lengths177.910, 41.170, 75.850
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.860 - 3.120
R-factor0.231
Rwork0.231
R-free0.27300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2z75
RMSD bond length0.004
RMSD bond angle0.900
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareCNS (1.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0003.150
High resolution limit [Å]3.1003.100
Rmerge0.0271.123
Number of reflections9873
<I/σ(I)>23.63.2
Completeness [%]96.996.1
Redundancy4.14.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529410% PEG 8000, 1 M lithium chloride, 50mM magnesium acetate, 50mM calcium chloride, 1mM spermine, 50mM cacodylate, 50mM HEPES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K

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PDB entries from 2024-08-14

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