4MAG
Crystal structure of the Periplasmic Sialic Acid Binding Protein from Vibrio Cholerea
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-11-19 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9793 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 74.977, 82.315, 119.354 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 11.730 - 1.450 |
R-factor | 0.184 |
Rwork | 0.182 |
R-free | 0.21940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3b50 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.233 |
Data reduction software | d*TREK (9.6L) |
Data scaling software | d*TREK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.910 | 19.910 | 1.500 |
High resolution limit [Å] | 1.450 | 3.120 | 1.450 |
Rmerge | 0.073 | 0.045 | 0.655 |
Total number of observations | 38503 | 38701 | |
Number of reflections | 65409 | ||
<I/σ(I)> | 7.9 | 28.1 | 1.8 |
Completeness [%] | 99.8 | 97.7 | 100 |
Redundancy | 6.04 | 5.51 | 5.97 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 277 | 36 mg/ml SiaP in 20 mM HEPES, 10 mM sodium chloride, pH 8.0 and reservoir solution (0.1 M MES, 20% w/v PEG-6000 at pH 6.0). , VAPOR DIFFUSION, HANGING DROP, temperature 277K |