4M6H
Structure of the reduced, metal-free form of Mycobacterium tuberculosis peptidoglycan amidase Rv3717
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-11-11 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.1159 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 125.358, 45.677, 67.789 |
| Unit cell angles | 90.00, 116.02, 90.00 |
Refinement procedure
| Resolution | 42.330 - 2.194 |
| R-factor | 0.2075 |
| Rwork | 0.205 |
| R-free | 0.23280 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3ne8 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.186 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 42.330 | 42.330 | 2.240 |
| High resolution limit [Å] | 2.194 | 5.970 | 2.194 |
| Rmerge | 0.091 | 0.026 | 0.519 |
| Number of reflections | 17421 | ||
| <I/σ(I)> | 7.5 | ||
| Completeness [%] | 97.3 | 99.2 | 96.2 |
| Redundancy | 2.3 | 2.2 | 2.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 200 mM sodium chloride, 100 mM TRIS, 25% PEG3350, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |






