Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4M54

The structure of the staphyloferrin B precursor biosynthetic enzyme SbnB bound to N-(1-amino-1-carboxyl-2-ethyl)-glutamic acid and NADH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2013-06-18
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths63.116, 63.116, 159.413
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.726 - 2.360
R-factor0.2269
Rwork0.223
R-free0.25810
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.703
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX (1.8.2-1309)
Refinement softwarePHENIX (1.8.2-1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.73050.0002.400
High resolution limit [Å]2.3606.4002.360
Rmerge0.1260.0550.590
Number of reflections13956
<I/σ(I)>6.5
Completeness [%]99.496.898.7
Redundancy6.98.15.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1 M Hepes, 0.2 M MgCl2, 29-33% PEG 400, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon