4LVC
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-26 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 107.720, 176.470, 104.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.850 - 1.740 |
R-factor | 0.14775 |
Rwork | 0.148 |
R-free | 0.17222 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3n58 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.618 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.850 | 7.780 | 1.790 |
High resolution limit [Å] | 1.740 | 5.500 | 1.740 |
Rmerge | 0.086 | 0.065 | 0.694 |
Number of reflections | 200550 | ||
<I/σ(I)> | 12.34 | 29.26 | 1.95 |
Completeness [%] | 98.7 | 99.8 | 97 |
Redundancy | 6.37 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.1 | 292 | 0.2 M ammonium acetate, pH 7.1, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 292K |