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4LVB

Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]93
Detector technologyPIXEL
Collection date2012-04-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979450
Spacegroup nameP 1 21 1
Unit cell lengths60.612, 106.681, 83.142
Unit cell angles90.00, 96.39, 90.00
Refinement procedure
Resolution82.630 - 1.836
R-factor0.1772
Rwork0.175
R-free0.21540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.039
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.6301.846
High resolution limit [Å]1.8361.836
Number of reflections90042
Completeness [%]98.398.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.62920.2uL + 0.2uL drops containing 6mg/mL Nampt, 0.1M Sodium phosphate, 25-29% polyethylene glycol 3350, 0.2M NaCl, pH 8.6, VAPOR DIFFUSION, HANGING DROP, temperature 292K

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