4LUG
Crystal structure of Inorganic Pyrophosphatase PPA1 from Arabidopsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-17 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | H 3 |
Unit cell lengths | 82.020, 82.020, 175.080 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.010 - 1.930 |
R-factor | 0.1568 |
Rwork | 0.155 |
R-free | 0.19960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1twl |
RMSD bond length | 0.019 |
RMSD bond angle | 1.396 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.2) |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.010 | 41.000 | 2.050 |
High resolution limit [Å] | 1.930 | 5.740 | 1.930 |
Rmerge | 0.043 | 0.017 | 0.598 |
Rmeas | 0.020 | 0.710 | |
Number of reflections | 32974 | 1254 | 5274 |
<I/σ(I)> | 18.76 | 59.02 | 2.04 |
Completeness [%] | 99.7 | 99.2 | 98.5 |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 292 | 0.1M succinic acid, 15%(w/v) PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 292.0K |