4LK4
Structure of Vibrio cholerae VesB protease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9999 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 121.570, 121.570, 71.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.300 - 2.400 |
R-factor | 0.1896 |
Rwork | 0.187 |
R-free | 0.23630 |
Structure solution method | MR-SAD |
Starting model (for MR) | 1eax |
RMSD bond length | 0.012 |
RMSD bond angle | 1.466 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.300 | 2.460 | |
High resolution limit [Å] | 2.400 | 10.730 | 2.400 |
Rmerge | 0.065 | 0.023 | 1.073 |
Number of reflections | 21358 | 283 | 1550 |
<I/σ(I)> | 20.43 | 53.29 | 2.33 |
Completeness [%] | 99.5 | 95 | 99.9 |
Redundancy | 6.31 | 6.48 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 277 | 0.1 M Tris-HCl, pH 9.0, 3.0 M sodium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K |