4LG3
Crystal structure of a DUF487 family protein (DESPIG_00776) from Desulfovibrio piger ATCC 29098 at 2.49 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97818,0.91837 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 85.413, 85.413, 197.896 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.707 - 2.400 |
R-factor | 0.1826 |
Rwork | 0.180 |
R-free | 0.22540 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.020 |
Data reduction software | XDS |
Data scaling software | XSCALE (July 4, 2012) |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.720 | 42.720 | 2.460 |
High resolution limit [Å] | 2.400 | 10.740 | 2.400 |
Rmerge | 0.087 | 0.034 | 1.160 |
Number of reflections | 33472 | 443 | 2440 |
<I/σ(I)> | 19.2 | 69.6 | 1.8 |
Completeness [%] | 99.8 | 98.8 | 99.9 |
Redundancy | 7.1 | 6.5 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 2.00M ammonium sulfate, 0.1M tris hydrochloride pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |