4LDD
Crystal Structure of Ebola virus VP40 Hexamer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 85 |
Detector technology | CCD |
Collection date | 2012-08-19 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97945 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 134.479, 134.479, 136.087 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.885 - 3.498 |
R-factor | 0.3071 |
Rwork | 0.306 |
R-free | 0.32250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.719 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1150)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 136.087 | |
High resolution limit [Å] | 3.497 | 3.497 |
Number of reflections | 16180 | |
Completeness [%] | 98.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M bicine, 15% PEG20000, 3% dextran sulfate sodium salt (Mr = 5 kDa), pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |