4KRO
Nanobody/VHH domain EgA1 in complex with the extracellular region of EGFR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-12-18 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.207, 96.288, 128.097 |
Unit cell angles | 90.00, 100.68, 90.00 |
Refinement procedure
Resolution | 38.193 - 3.054 |
R-factor | 0.2235 |
Rwork | 0.221 |
R-free | 0.27950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1YY9 AND 4KRN |
RMSD bond length | 0.005 |
RMSD bond angle | 0.897 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.100 |
High resolution limit [Å] | 3.050 | 8.270 | 3.050 |
Rmerge | 0.099 | 0.030 | 0.463 |
Number of reflections | 29807 | ||
<I/σ(I)> | 10.2 | ||
Completeness [%] | 98.8 | 92.3 | 99.6 |
Redundancy | 2.3 | 2.2 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 17.5% PEG3350, 1.5 M sodium chloride, 5% glycerol, 0.1 M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |