4KNL
Crystal structure of Staphylococcus aureus hydrolase AmiA in complex with its ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00605 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.810, 82.830, 77.430 |
Unit cell angles | 90.00, 96.18, 90.00 |
Refinement procedure
Resolution | 48.209 - 1.550 |
R-factor | 0.1725 |
Rwork | 0.171 |
R-free | 0.19810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4knk |
RMSD bond length | 0.012 |
RMSD bond angle | 1.382 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.210 | 1.590 |
High resolution limit [Å] | 1.550 | 1.550 |
Number of reflections | 122961 | |
<I/σ(I)> | 13.9 | 1.7 |
Completeness [%] | 99.1 | 98.1 |
Redundancy | 3.6 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 0.1 M MES/imidazole, pH 6.5, 0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M sodium citrate, 0.02 M racemic sodium/potassium tartrate, 0.02 M sodium oxamate, 12.5% w/v PEG1000, 12.5% w/v PEG3350, 12.5% w/v MPD, VAPOR DIFFUSION, HANGING DROP, temperature 295K |