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4KCU

Pyruvate kinase (PYK) from Trypanosoma brucei soaked with D-Malate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Spacegroup nameI 2 2 2
Unit cell lengths103.370, 108.270, 265.190
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.180 - 2.350
R-factor0.16219
Rwork0.160
R-free0.20576
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.141
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]74.7702.480
High resolution limit [Å]2.3502.350
Number of reflections62179
Completeness [%]99.999.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.227715-20% PEG 8,000, 10-20% glycerol, 80 uM F26BP, 800 uM Ponceau S, 50 mM TEA, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-10-09

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