Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KAD

Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N1-(2.3-dihydro-1H-inden-5-yl)acetam

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2013-03-28
DetectorADSC QUANTUM 315
Wavelength(s)1.075
Spacegroup nameP 1 21 1
Unit cell lengths51.253, 81.199, 82.922
Unit cell angles90.00, 98.45, 90.00
Refinement procedure
Resolution40.200 - 1.700
R-factor0.16781
Rwork0.165
R-free0.21762
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4e3a
RMSD bond length0.008
RMSD bond angle1.320
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.730
High resolution limit [Å]1.7004.6101.700
Rmerge0.0980.0750.423
Number of reflections72142
<I/σ(I)>8.8
Completeness [%]97.498.978.8
Redundancy3.63.73
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52980.2M AMMONIUM ACETATE, 0.1M BIS:TRIS:HCL, PH 6.5, 25% PEG335, VAPOR DIFFUSION, SITTING DROP, temperature 298K

249524

PDB entries from 2026-02-18

PDB statisticsPDBj update infoContact PDBjnumon