4K1F
Crystal structure of reduced tryparedoxin peroxidase from leishmania major at 2.34 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-14 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 111.811, 226.203, 91.719 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 113.100 - 2.340 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.24670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tue |
RMSD bond length | 0.015 |
RMSD bond angle | 1.530 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 113.100 | 113.100 | 2.480 |
High resolution limit [Å] | 2.340 | 6.940 | 2.340 |
Rmerge | 0.162 | 1.070 | 1.070 |
Rmeas | 0.041 | 1.189 | |
Number of reflections | 49113 | 2023 | 7500 |
<I/σ(I)> | 10.26 | 35.09 | 1.65 |
Completeness [%] | 98.9 | 99 | 94.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294 | 20% PEG 3350, 0.2M NaSO4, 0.1M TRIS-HCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K |