4K0B
Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAM and PPi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-13 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 150.981, 150.981, 222.549 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.420 - 2.390 |
R-factor | 0.1724 |
Rwork | 0.171 |
R-free | 0.19780 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.678 |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.8.2_1309) |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.050 | |
High resolution limit [Å] | 1.930 | 5.750 | 1.930 |
Rmerge | 0.165 | 0.053 | 3.689 |
Rmeas | 0.175 | 0.056 | 4.297 |
Number of reflections | 215744 | 8204 | 33698 |
<I/σ(I)> | 8.66 | 35.85 | 0.29 |
Completeness [%] | 99.4 | 99.8 | 96.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 298 | Protein Solution (9.0 mg/ml protein in 25mM Tris pH 8.0, 5mM ADP, 10mM Methione, 10mM MgCl2, 50mM KCl and 5mM DTT) mixed in a 1:1 ratio with the well solution (1.4M Sodium phosphate monobasic monohydrate / Potassium phosphate dibasic, pH 5.6) Cryoprotected with 25% Ethylene Glycol, VAPOR DIFFUSION, SITTING DROP, temperature 298K |