4JVY
Structure of the STAR (signal transduction and activation of RNA) domain of GLD-1 bound to RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Detector technology | CCD |
Collection date | 2012-04-23 |
Detector | ADSC QUANTUM 315r |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 142.274, 142.274, 76.652 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.900 - 2.853 |
R-factor | 0.1797 |
Rwork | 0.175 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.108 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 2.950 |
High resolution limit [Å] | 2.850 | 6.090 | 2.850 |
Rmerge | 0.076 | 0.032 | 0.654 |
Number of reflections | 20941 | ||
<I/σ(I)> | 12 | ||
Completeness [%] | 99.5 | 98 | 99.9 |
Redundancy | 5.6 | 5.4 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | SODIUM ACETATE, PH 6.5, VAPOR DIFFUSION |