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4JUY

Crystal structure of the PUB domain of E3 ubiquitin ligase RNF31

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-02-11
DetectorADSC QUANTUM 315r
Wavelength(s)0.97926
Spacegroup nameF 4 3 2
Unit cell lengths256.488, 256.488, 256.488
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.410 - 2.400
R-factor0.237
Rwork0.236
R-free0.25820
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle1.256
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareSOLVE (2.13)
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.440
High resolution limit [Å]2.4002.400
Rmerge0.0720.973
Number of reflections28765
<I/σ(I)>43.63
Completeness [%]100.0100
Redundancy14.214.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52910.8M K/Na tartrate tetrahydrate, 0.5% PEG MME 5000, 0.1 M BisTris, pH 8.5, vapor diffusion, hanging drop, temperature 291K

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PDB entries from 2024-09-11

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