4JQV
HLA-B*18:01 in complex with Epstein-Barr virus BZLF1-derived peptide (residues 173-180)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Synchrotron site | APS |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-24 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97940 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.848, 81.251, 110.892 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.626 - 1.500 |
R-factor | 0.1907 |
Rwork | 0.189 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sys |
RMSD bond length | 0.006 |
RMSD bond angle | 1.067 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.220 | 1.580 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.061 | 0.525 |
Number of reflections | 73568 | |
<I/σ(I)> | 12.2 | 2.4 |
Completeness [%] | 99.1 | 98.5 |
Redundancy | 3.6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.1 M citrate, pH 5.6, 0.2 M ammonium acetate, 16-26% PEG4000, VAPOR DIFFUSION, HANGING DROP, temperature 293K |