4JGS
Crystal structure of the xmrv tm retroviral fusion core
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-01-10 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 99.973, 148.420, 58.098 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.580 - 2.200 |
R-factor | 0.214 |
Rwork | 0.214 |
R-free | 0.26600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mof |
RMSD bond length | 0.013 |
RMSD bond angle | 1.310 |
Data reduction software | d*TREK (9.9.8.9D) |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.580 | 47.580 | 2.280 |
High resolution limit [Å] | 2.200 | 4.740 | 2.200 |
Rmerge | 0.088 | 0.041 | 0.554 |
Total number of observations | 31344 | 26966 | |
Number of reflections | 44752 | ||
<I/σ(I)> | 9 | 24.8 | 2.1 |
Completeness [%] | 99.9 | 99.3 | 99.6 |
Redundancy | 6.6 | 6.3 | 5.73 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 23% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.5, 0.2 M NaCl and 4% (v/v) 2,2,2-trifluoroethanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K |