4JEC
Joint neutron and X-ray structure of per-deuterated HIV-1 protease in complex with clinical inhibitor amprenavir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Beamline | IN-HOUSE |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Collection date | 2012-11-01 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.186, 87.431, 46.405 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.000 |
R-factor | 0.244 |
Rwork | 0.244 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.000 |
Data reduction software | LAUEGEN |
Data scaling software | LSCALE |
Phasing software | CNS |
Refinement software | nCNS (1.0.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.110 | 2.110 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.128 | 0.269 |
Number of reflections | 12800 | |
<I/σ(I)> | 7.5 | 4.1 |
Completeness [%] | 50.9 | 64.9 |
Redundancy | 3.2 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 290 | 0.1M MES, pH=6; 0.8M NaCl, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 290 | 0.1M MES, pH=6; 0.8M NaCl, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |