4JC6
Mercury activation of the plant aquaporin SoPIP2;1 - structural and functional characterization
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 123.546, 141.818, 186.515 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.900 - 2.152 |
R-factor | 0.19843 |
Rwork | 0.197 |
R-free | 0.22704 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1z98 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.333 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.230 |
High resolution limit [Å] | 2.150 | 4.630 | 2.150 |
Rmerge | 0.129 | 0.069 | 0.639 |
Number of reflections | 176544 | ||
<I/σ(I)> | 5.9 | ||
Completeness [%] | 99.8 | 99.9 | 98.9 |
Redundancy | 6 | 5.9 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 280 | The protein was incubated with 5mM HgCl2, and excess HgCl2 was washed away. Crystallisation condition was 26% PEG400, 25mM Tris pH 7.0, 100mM NaCl. The precipitant solution was mixed with 1/5 0.1M CdCl2. Protein and precipitant solution was mixed in 1:1 ratio , VAPOR DIFFUSION, HANGING DROP, temperature 280K |