4JBU
1.65A structure of the T3SS tip protein LcrV (G28-D322, C273S) from Yersinia pestis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-01-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.553, 51.442, 65.178 |
Unit cell angles | 90.00, 92.00, 90.00 |
Refinement procedure
Resolution | 34.330 - 1.650 |
R-factor | 0.1795 |
Rwork | 0.177 |
R-free | 0.22020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1r6f |
RMSD bond length | 0.011 |
RMSD bond angle | 1.196 |
Data scaling software | SCALA (CCP4_3.3.16) |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (dev_961) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.440 | 51.440 | 1.740 |
High resolution limit [Å] | 1.650 | 5.220 | 1.650 |
Rmerge | 0.034 | 0.010 | 0.500 |
Total number of observations | 3174 | 14857 | |
Number of reflections | 31392 | ||
<I/σ(I)> | 17.9825 | 56.8 | 2.2 |
Completeness [%] | 99.3 | 95.2 | 99.84 |
Redundancy | 3.29 | 3.13 | 3.27 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | 25% (w/v) PEG 3350, 100 mM Bicine, pH 7.0, vapor diffusion, temperature 293K |