4J5E
Human Cyclophilin D Complexed with an Inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-19 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.93340 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 57.040, 57.040, 87.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.820 - 0.990 |
R-factor | 0.1197 |
Rwork | 0.119 |
R-free | 0.13640 |
Structure solution method | Isomorphous Replacement |
RMSD bond length | 0.008 |
RMSD bond angle | 1.355 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.19) |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.820 | 15.820 | 1.040 |
High resolution limit [Å] | 0.990 | 3.130 | 0.990 |
Rmerge | 0.071 | 0.035 | 0.398 |
Total number of observations | 18739 | 27074 | |
Number of reflections | 79532 | ||
<I/σ(I)> | 10.5 | 16.5 | 1.9 |
Completeness [%] | 98.0 | 98.3 | 87.5 |
Redundancy | 5.9 | 6.8 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 291 | 30% PEG4000, pH 7.3, vapor diffusion, hanging drop, temperature 291.0K |