4IV6
X-ray crystal structure of an isovaleryl-CoA dehydrogenase from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97740 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 105.820, 105.820, 169.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.620 - 2.000 |
R-factor | 0.1513 |
Rwork | 0.149 |
R-free | 0.18480 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.441 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.050 | |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.104 | 0.028 | 0.551 |
Number of reflections | 64445 | 789 | 4720 |
<I/σ(I)> | 13.73 | 38.25 | 3.31 |
Completeness [%] | 98.1 | 89.2 | 99.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | JCSG+ well B10: 0.2 M magnesium chloride, 0.1 M sodium cacodylate, pH 6.50, 50% PEG200, 21.63 mg/mL protein, VAPOR DIFFUSION, SITTING DROP, temperature 289K |