4IRT
Crystal structure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-17 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.918401,0.979493,0.979296 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.457, 48.051, 88.599 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.533 - 1.740 |
R-factor | 0.1703 |
Rwork | 0.169 |
R-free | 0.20470 |
Structure solution method | MAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.449 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.533 | 29.533 | 1.790 |
High resolution limit [Å] | 1.740 | 7.780 | 1.740 |
Rmerge | 0.041 | 0.613 | |
Total number of observations | 1850 | 7896 | |
Number of reflections | 44640 | ||
<I/σ(I)> | 8.4 | 14.6 | 1.2 |
Completeness [%] | 98.6 | 95.9 | 88.5 |
Redundancy | 3.4 | 3.3 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 1.00M lithium chloride, 14.00% polyethylene glycol 6000, 0.1M MES pH 6.5, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K |