4INX
Structure of Pheromone-binding protein 1 in complex with (Z,Z)-11,13- hexadecadienol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-12 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.2 |
Spacegroup name | P 65 |
Unit cell lengths | 57.532, 57.532, 93.501 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.100 - 1.853 |
R-factor | 0.1701 |
Rwork | 0.168 |
R-free | 0.21380 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.022 |
RMSD bond angle | 1.872 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.920 |
High resolution limit [Å] | 1.850 | 3.990 | 1.850 |
Rmerge | 0.040 | 0.026 | 0.113 |
Number of reflections | 14800 | ||
<I/σ(I)> | 16.3 | ||
Completeness [%] | 98.3 | 97.7 | 91.8 |
Redundancy | 2.8 | 2.8 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | Purified AtraPBP1 was crystallized at room temperature by the hanging drop vapor diffusion method. Drops composed of 1ul protein solution (30 mg/ml) and 1ul of the precipitant solution were suspended over a reservoir containing the precipitant solution (1.6 M sodium citrate pH 6.5). Crystals used in data collection were transferred into Paratone-N oil and flash-cooled in a stream of liquid nitrogen at 110 K, VAPOR DIFFUSION, HANGING DROP, temperature 295K |