4ILK
Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-03-23 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.322, 97.133, 144.101 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.533 - 2.003 |
R-factor | 0.1675 |
Rwork | 0.165 |
R-free | 0.21770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.172 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.088 | 0.032 | 0.777 |
Number of reflections | 45465 | ||
<I/σ(I)> | 9 | ||
Completeness [%] | 99.6 | 100 | 99.8 |
Redundancy | 7.6 | 7.7 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 282 | Protein solution was at 10 mg/mL containing 20 mM Tris (pH 7.5), 100 mM NaCl and 50 mM imidazole. Mother liqueur contained 0.2 M ammonium chloride, 0.01 M calcium chloride dihydrate, 0.05 M Tris (pH 8.5), 30% PEG 4,000. Cryoprotectant was 13% glycerol, vapor diffusion, sitting drop, temperature 282K |