4IFX
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, FAD substrate bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 116.825, 47.079, 57.583 |
Unit cell angles | 90.00, 102.00, 90.00 |
Refinement procedure
Resolution | 28.580 - 1.452 |
R-factor | 0.17391 |
Rwork | 0.172 |
R-free | 0.20354 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4ifu |
RMSD bond length | 0.022 |
RMSD bond angle | 2.228 |
Data reduction software | DENZO |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.480 |
High resolution limit [Å] | 1.450 | 3.940 | 1.450 |
Rmerge | 0.040 | 0.016 | 0.628 |
Number of reflections | 53215 | ||
<I/σ(I)> | 13.3 | ||
Completeness [%] | 98.4 | 96.4 | 95.3 |
Redundancy | 4 | 4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging-drop vapor diffusion | 6.5 | 293 | 0.1 M MES, 0.8 M sodium acetate, 0.1 M NaCl, 20% (w/v) ethylene glycol, pH 6.5, hanging-drop vapor diffusion, temperature 293K |