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4IFH

Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM44619

Replaces:  4GSE
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Wavelength(s)0.9793
Spacegroup nameP 65
Unit cell lengths263.022, 263.022, 90.590
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.706 - 3.286
R-factor0.1845
Rwork0.182
R-free0.22350
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.886
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]3.300
Number of reflections54260
Completeness [%]98.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7291.1510% PEG 5000, 100mM HEPES, 14% Tacsimate, 10% Dioxane, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K

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PDB entries from 2024-07-17

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