4ID9
Crystal structure of a short-chain dehydrogenase/reductase superfamily protein from agrobacterium tumefaciens (TARGET EFI-506441) with bound nad, monoclinic form 1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 31-ID |
| Synchrotron site | APS |
| Beamline | 31-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-12-08 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 52.356, 74.426, 95.341 |
| Unit cell angles | 90.00, 97.10, 90.00 |
Refinement procedure
| Resolution | 29.248 - 1.600 |
| R-factor | 0.1825 |
| Rwork | 0.181 |
| R-free | 0.21280 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3enk |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.078 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (0.1.27) |
| Phasing software | BALBES |
| Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 94.610 | 1.630 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.050 | 0.477 |
| Number of reflections | 94951 | |
| <I/σ(I)> | 12.8 | 2.3 |
| Completeness [%] | 99.1 | 98.8 |
| Redundancy | 3.5 | 3.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | sitting drop vapor diffusion | 6.5 | 298 | Protein (10mM Tris pH 7.9, 5 mM NAD, 5 mM UDP-GAL; Reservoir (0.2 M Ammonium Acetate, 0.1 M Bis-Tris:HCl pH 6.5, 25% (w/v) PEG 3350); Cryoprotection (0.40 mM Ammonium Acetate, 0.20 mM Bis-Tris:HCl pH 6.5, 40% (w/v) PEG 3350, 5 mM NAD, 5 mM UDP-GAL), sitting drop vapor diffusion, temperature 298K |






