4I9J
Structure of the N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus bound to diC4PC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-07-26 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.649, 57.473, 61.752 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.761 - 1.850 |
R-factor | 0.1627 |
Rwork | 0.160 |
R-free | 0.20760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v18 |
RMSD bond length | 0.019 |
RMSD bond angle | 1.943 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.880 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.084 | 0.789 |
Number of reflections | 230045 | |
<I/σ(I)> | 47.395 | 2.823 |
Completeness [%] | 92.7 | 57.2 |
Redundancy | 9.3 | 6.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 27% PEG 4000, 0.1M sodium acetate, 0.1M magnesium nitrate, 0.15M ammonium acetate , pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |