4HM1
Naphthalene 1,2-Dioxygenase bound to 1-indanone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-11-01 |
Detector | NOIR-1 |
Wavelength(s) | 1.04 |
Spacegroup name | H 3 2 |
Unit cell lengths | 139.935, 139.935, 208.238 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 15.986 - 1.500 |
R-factor | 0.151 |
Rwork | 0.149 |
R-free | 0.19010 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.205 |
Data reduction software | d*TREK (9.2LDz) |
Data scaling software | d*TREK |
Phasing software | AMoRE |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.990 | 15.990 | 1.550 |
High resolution limit [Å] | 1.500 | 3.220 | 1.500 |
Rmerge | 0.062 | 0.027 | 0.392 |
Total number of observations | 47245 | 26772 | |
Number of reflections | 123676 | ||
<I/σ(I)> | 12.2 | 34.9 | 2.7 |
Completeness [%] | 99.3 | 98.4 | 95.3 |
Redundancy | 3.48 | 3.72 | 2.26 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES , pH 5.0, VAPOR DIFFUSION, temperature 279.15K |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES , pH 5.0, VAPOR DIFFUSION, temperature 279.15K |