4HBD
Crystal structure of KANK2 ankyrin repeats
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-19 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 150.061, 65.568, 28.758 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.540 - 1.720 |
R-factor | 0.1781 |
Rwork | 0.176 |
R-free | 0.20720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | UNPUBLISHED MODEL OF SAME PROTEIN BUT DIFFERENT CRYSTAL DIMENSIONS (P21212; A B C=61.46 63.59 163.08 FOR DERIVATIVE (IODIDE? DIFFRACTION INTENSITIES INCLUDED). THAT STRUCTURE WAS SOLVED WITH SHELX SIRAS (ISOMORPHOUS "NATIVE" DATA NOT PROVIDED AS SAD DOES ALSO WORK) |
RMSD bond length | 0.016 |
RMSD bond angle | 1.524 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | SHELX |
Refinement software | REFMAC (5.7.0027) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 75.031 | 37.515 | 1.810 |
High resolution limit [Å] | 1.720 | 5.440 | 1.720 |
Rmerge | 0.033 | 0.961 | |
Total number of observations | 6829 | 32689 | |
Number of reflections | 31276 | ||
<I/σ(I)> | 17.7 | 12.4 | 0.8 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 7.1 | 6 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 20% PEG 3350, 0.2 M ammonium nitrate, VAPOR DIFFUSION, temperature 291K | |
2 | VAPOR DIFFUSION, SITTING DROP | 291 | 20% PEG 3350, 0.2 M ammonium iodide, VAPOR DIFFUSION, SITTING DROP, temperature 291K |