4GYX
The von Willebrand Factor A3 domain binding region of type III collagen stabilized by the cysteine knot
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-29 |
Detector | NOIR-1 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 19.070, 26.990, 64.120 |
Unit cell angles | 90.00, 92.48, 90.00 |
Refinement procedure
Resolution | 19.050 - 1.490 |
R-factor | 0.1805 |
Rwork | 0.176 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dmt |
RMSD bond length | 0.006 |
RMSD bond angle | 2.146 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.050 | 19.050 | 1.570 |
High resolution limit [Å] | 1.490 | 4.710 | 1.490 |
Rmerge | 0.083 | 0.068 | 0.383 |
Number of reflections | 10752 | ||
<I/σ(I)> | 8.2 | 14.5 | 3.2 |
Completeness [%] | 98.9 | 98.4 | 93.1 |
Redundancy | 3.5 | 3.4 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 295 | 28% PEG 3350, 0.1M sodium acetate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |