4GX7
Vibrio Cholerae Cytolysin Beta-Prism Domain With Methyl-Alpha-Mannose Bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | OTHER |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-01-30 |
Detector | OXFORD ONYX CCD |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 99.770, 99.770, 172.366 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.895 - 2.850 |
R-factor | 0.1973 |
Rwork | 0.195 |
R-free | 0.24810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1XEZ (Residues 585-716) |
RMSD bond length | 0.005 |
RMSD bond angle | 1.045 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.895 | 24.895 | 3.000 |
High resolution limit [Å] | 2.850 | 9.010 | 2.850 |
Rmerge | 0.045 | 0.477 | |
Total number of observations | 3224 | 16809 | |
Number of reflections | 23789 | ||
<I/σ(I)> | 7.1 | 15.6 | 1.5 |
Completeness [%] | 99.8 | 94.8 | 100 |
Redundancy | 4.9 | 4.1 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 0.1 M ammonium acetate, 0.1 M Bis-tris, 25% PEG 3350, 30 mM Me-alpha-mannose, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |