Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GVP

Crystal Structure of the Response Regulator Protein VraR from Staphylococcus aureus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyCCD
Collection date2010-03-07
DetectorADSC QUANTUM 270
Wavelength(s)0.91810
Spacegroup nameP 21 21 21
Unit cell lengths78.149, 103.804, 114.418
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.162 - 2.030
R-factor0.1741
Rwork0.172
R-free0.22890
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.968
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.2.3)
Refinement softwarePHENIX (1.8_1066)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.070
High resolution limit [Å]2.0305.5102.030
Rmerge0.0960.0570.607
Number of reflections60715
<I/σ(I)>955.53.3
Completeness [%]99.899.899.5
Redundancy7.46.77.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.527780 mM Tris-HCl, 160 mM ammonium acetate, 16% (w/v) PEG 4000, 6% 2-methyl-2,4-pentanediol, pH 8.5, vapor diffusion, temperature 277K

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon