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1.78 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) in Complex with Quinate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2012-07-20
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97857
Spacegroup nameP 1 21 1
Unit cell lengths48.669, 74.427, 63.135
Unit cell angles90.00, 100.57, 90.00
Refinement procedure
Resolution28.660 - 1.780
R-factor0.16079
Rwork0.159
R-free0.18801
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3l2i
RMSD bond length0.008
RMSD bond angle1.351
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.810
High resolution limit [Å]1.7801.780
Rmerge0.0560.314
Number of reflections41378
<I/σ(I)>17.52.4
Completeness [%]97.299.3
Redundancy32.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5300protein: 7.5 mg/mL in 0.5 M sodium shikimate, 0.01 M Tris-HCl, crystallization condition: Qiagen PEG II B8 (0.01 M nickel chloride, 0.1 M Tris, pH 8.5, 20% w/v PEG2000 MME), crystal incubated in and frozen from 5 M sodium quinate, VAPOR DIFFUSION, SITTING DROP, temperature 300K

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