4GSJ
Crystal structure of Atg7 NTD K14A F16A D18A mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-05-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 56.826, 74.631, 76.475 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.612 - 1.695 |
R-factor | 0.1777 |
Rwork | 0.176 |
R-free | 0.20680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3t7f |
RMSD bond length | 0.006 |
RMSD bond angle | 1.005 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.760 |
High resolution limit [Å] | 1.695 | 3.660 | 1.695 |
Rmerge | 0.060 | 0.043 | 0.316 |
Number of reflections | 35213 | ||
<I/σ(I)> | 46.4 | ||
Completeness [%] | 96.3 | 99.7 | 77.4 |
Redundancy | 6.5 | 6.7 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.1 | 277 | 7.2% isopropanol, 50 mM citrate buffer, pH 4.1, 0.1 M potassium thiocyanate, VAPOR DIFFUSION, HANGING DROP, temperature 277K |