4GO3
Crystal structure of PnpE from Pseudomonas sp. WBC-3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-03-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 83.531, 144.252, 138.288 |
Unit cell angles | 90.00, 93.59, 90.00 |
Refinement procedure
Resolution | 41.684 - 2.704 |
R-factor | 0.2238 |
Rwork | 0.223 |
R-free | 0.23670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a4v |
RMSD bond length | 0.020 |
RMSD bond angle | 1.499 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.4_486)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.800 |
High resolution limit [Å] | 2.000 | 5.810 | 2.700 |
Rmerge | 0.086 | 0.053 | 0.312 |
Number of reflections | 86090 | ||
<I/σ(I)> | 14.5 | 25.1 | 3.6 |
Completeness [%] | 96.8 | 99.8 | 92.2 |
Redundancy | 3.6 | 3.8 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG 3350, 0.2M potassium nitrate, VAPOR DIFFUSION, HANGING DROP, temperature 293K |