4GLQ
Crystal Structure of the blue-light absorbing form of the Thermosynechococcus elongatus PixJ GAF-domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-01-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97895 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 47.040, 47.040, 125.966 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.068 - 1.772 |
R-factor | 0.159 |
Rwork | 0.155 |
R-free | 0.19960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SyB Cph1-GAF domain |
RMSD bond length | 0.007 |
RMSD bond angle | 1.264 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.5.0) |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
Rmerge | 0.069 | 0.052 | 0.323 |
Number of reflections | 14530 | ||
<I/σ(I)> | 10.7 | ||
Completeness [%] | 99.8 | 100 | 98.5 |
Redundancy | 10 | 9.2 | 9.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 50 mM NaCl, 0.3 mM tris(2-carboxyethyl)phosphine, 10 mM HEPES-NaOH (pH 7.8), 25% polyethylene glycol 3350, 200 mM sodium chloride, 40 mM glycine, 100 mM BIS-TRIS-HCl, (pH 5.5), vapor diffusion, sitting drop, temperature 293K |