Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4G4K

Structure of the Staphylococcus aureus AgrA LytTR Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2009-06-18
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameP 21 21 21
Unit cell lengths41.414, 45.894, 112.138
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.716 - 1.520
R-factor0.1813
Rwork0.180
R-free0.20860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bs1
RMSD bond length0.006
RMSD bond angle1.048
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1066)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.00025.0001.550
High resolution limit [Å]1.5204.1201.520
Number of reflections32840
<I/σ(I)>16.6522
Completeness [%]97.297.489.8
Redundancy3.33.32.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8277100 mM Tris, 150 mM LiSO4, 11% (w/v) PEG 4000, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon