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4FZM

Crystal structure of the bacteriocin syringacin M from Pseudomonas syringae pv. tomato DC3000

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2011-11-29
DetectorADSC QUANTUM 315r
Wavelength(s)0.9795, 0.9796, 0.9253
Spacegroup nameP 63 2 2
Unit cell lengths159.687, 159.687, 100.173
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.340 - 2.830
R-factor0.20227
Rwork0.200
R-free0.23914
Structure solution methodMAD
RMSD bond length0.020
RMSD bond angle2.028
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareSHARP
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.3402.910
High resolution limit [Å]2.8302.830
Rmerge0.0590.693
Number of reflections17330
<I/σ(I)>19.53.1
Completeness [%]99.1100
Redundancy8.28.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52897% w/v PEG 8000, 30% v/v ethylene glycol 0.03 M CaCl2, 0.03 M MgCl2, 5% dimethyl sulfoxide, 0.1 M Bicine/Tris base, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K

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