4FHA
Structure of Dihydrodipicolinate Synthase from Streptococcus pneumoniae,bound to pyruvate and lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-05 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95371 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 60.381, 106.368, 106.232 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.910 - 1.880 |
R-factor | 0.1599 |
Rwork | 0.159 |
R-free | 0.18290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3H5D |
RMSD bond length | 0.005 |
RMSD bond angle | 0.997 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 75.180 | 47.557 | 1.980 |
High resolution limit [Å] | 1.880 | 5.940 | 1.880 |
Rmerge | 0.042 | 0.340 | |
Total number of observations | 24325 | 59801 | |
Number of reflections | 55338 | ||
<I/σ(I)> | 27.3 | 15.1 | 2.2 |
Completeness [%] | 98.0 | 98.7 | 86.7 |
Redundancy | 13.7 | 12.5 | 8.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.2 M sodium fluoride, 0.1 M bis-tris propane, 20% (w/v) PEG 3350, 5% (w/v) 1,4-dioxane, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |