4F62
Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-08-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9793 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 96.491, 96.491, 156.390 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.059 - 2.101 |
R-factor | 0.1782 |
Rwork | 0.177 |
R-free | 0.20290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lsn |
RMSD bond length | 0.007 |
RMSD bond angle | 1.012 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.076 | 0.034 | 0.751 |
Number of reflections | 49760 | ||
<I/σ(I)> | 10.3 | ||
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 11.8 | 11.4 | 11.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | protein: 10 mM HEPES, pH 7.5, 150 mM sodium chloride, 10% glycerol, 1 mM DTT, 5 mM magnesium chloride, reservoir: 0.1 M sodium chloride, 0.1 M HEPES, pH 7.5, 1.6 M ammonium sulfate, cryoprotectant: reservoir + 20% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 298K |