4F5N
Open ternary complex of R283K DNA polymerase beta with a metal free dCTP analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-26 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.322, 79.181, 54.857 |
Unit cell angles | 90.00, 105.53, 90.00 |
Refinement procedure
Resolution | 22.098 - 1.800 |
R-factor | 0.1903 |
Rwork | 0.187 |
R-free | 0.21960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ISB.pdb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.027 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.000 | 2.440 | 1.860 |
High resolution limit [Å] | 1.800 | 2.270 | 1.800 |
Rmerge | 0.047 | 0.095 | 0.229 |
Number of reflections | 209537 | ||
<I/σ(I)> | 18.3 | 3 | |
Completeness [%] | 98.9 | 100 | 90.8 |
Redundancy | 5.2 | 5.5 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 50mM Imidazole, 350mM Sodium Acetate, 18% PEG3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K |