4EYE
Crystal structure of a probable oxidoreductase from Mycobacterium abscessus solved by iodide ion SAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-04-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 78.640, 46.340, 84.130 |
Unit cell angles | 90.00, 93.14, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.100 |
R-factor | 0.1875 |
Rwork | 0.185 |
R-free | 0.23450 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.433 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 9.390 | 2.150 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.072 | 0.044 | 0.470 |
Number of reflections | 35731 | 771 | 2598 |
<I/σ(I)> | 17.46 | 37.17 | 4 |
Completeness [%] | 99.8 | 100 | 100 |
Redundancy | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | MyabA.01189.a.A1 PS00933 at 28 mg/mL supplemented with 0.5 M KI against Morpheus screen condition D4, 12.5% PEG 1000, 12.5% PEG 3350, 12.5% MPD, 0.1 M MES/imidazole pH 6.5, 0.02 M alcohols, crystal tracking ID 233762d4, VAPOR DIFFUSION, SITTING DROP, temperature 289K |