4EQ5
DNA ligase from the archaeon Thermococcus sibiricus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | KURCHATOV SNC BEAMLINE K4.4 |
Synchrotron site | KURCHATOV SNC |
Beamline | K4.4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-01 |
Detector | RAYONIX SX-165mm |
Wavelength(s) | 0.985 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.590, 87.540, 126.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.295 - 2.850 |
R-factor | 0.2772 |
Rwork | 0.273 |
R-free | 0.35750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cfm |
RMSD bond length | 0.010 |
RMSD bond angle | 1.500 |
Data scaling software | XDS |
Phasing software | BALBES |
Refinement software | PHENIX ((phenix.refine: 1.7.2_869)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.850 |
High resolution limit [Å] | 2.700 | 7.820 | 2.690 |
Rmerge | 0.110 | ||
Number of reflections | 18232 | ||
<I/σ(I)> | 12.9 | 52.67 | 0.97 |
Completeness [%] | 97.6 | 91.6 | 91.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.085 M HEPES, 8.5% 2-propanol (v/v), 17% (w/v) PEG 4000, 15% (v/v) glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |