Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E9M

NOD1 card domain with three disulfide-clinched, domain-swapped dimers in the asymmetric unit

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2011-05-01
DetectorADSC QUANTUM 210
Wavelength(s)0.9770
Spacegroup nameP 21 21 21
Unit cell lengths82.846, 85.335, 113.682
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.840 - 2.150
R-factor0.245
Rwork0.245
R-free0.27500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2nz7
RMSD bond length0.006
RMSD bond angle1.200
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.00050.0002.190
High resolution limit [Å]2.1505.8302.150
Number of reflections34341
<I/σ(I)>9.66170.79
Completeness [%]75.997.87
Redundancy3.63.91.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.22882.07 M AMMONIUM CITRATE (DIBASIC), 6.7% (W/V) PEG3350, 10 mM TRIS-HCL FINAL PH ~5.2, VAPOR DIFFUSION, HANGING DROP, temperature 288K

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon