4E96
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor PFi-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-05-13 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.710, 46.710, 78.250 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.350 - 1.920 |
R-factor | 0.2159 |
Rwork | 0.213 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oss |
RMSD bond length | 0.016 |
RMSD bond angle | 1.512 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.355 | 19.572 | 2.010 |
High resolution limit [Å] | 1.910 | 6.040 | 1.910 |
Rmerge | 0.110 | 0.043 | 0.819 |
Total number of observations | 1493 | 6852 | |
Number of reflections | 10412 | ||
<I/σ(I)> | 8.8 | 9.5 | 0.9 |
Completeness [%] | 99.5 | 97.1 | 99 |
Redundancy | 4.6 | 4 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2M Na(malonate) 0.1M BTProp pH 8.5 20% PEG3350 10% EtGly, VAPOR DIFFUSION, SITTING DROP, temperature 277K |